SCS-C000056

cyclo L-Trp-L-Phe

Pathway: Alkaloids | Amino acids and Peptides Superclass: Peptide alkaloids | Small peptides Class: Dipeptides | Indole diketopiperazine alkaloids (L-Trp, L-Trp) | Other indole diketopiperazine alkaloids | Simple diketopiperazine alkaloids

Chemical Structure

Structure of cyclo L-Trp-L-Phe
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Aspergillus hiratsukae SCSIO 7S2001 (SCSIO 7S2001)
South China Sea
DOI: 10.3390/md20010071  · Marine Drugs
Aspergillus versicolor (coral-associated fungus)
South China Sea  · -20m  · 112°20′E,16°50′N
DOI: 10.1007/s00449-010-0464-0  · Bioprocess and Biosystems Engineering

Drug-likeness (Lipinski Ro5)

Molecular Weight
333.0 Da
Threshold ≤ 500
ALogP
1.94
Threshold ≤ 5
H-Bond Donors
3
Threshold ≤ 5
H-Bond Acceptors
2
Threshold ≤ 10
Passes Lipinski Rule of Five — drug-like candidate

Chemical Properties

Molecular Formula:
C20H19N3O2
Molecular Weight:
333.0000 Da
SMILES:
O=C1N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N[C@H]1Cc1ccccc1
InChIKey:
CUVKAUWOMPJEMI-ROUUACIJSA-N
InChI:
InChI=1S/C20H19N3O2/c24-19-17(10-13-6-2-1-3-7-13)22-20(25)18(23-19)11-14-12-21-16-9-5-4-8-15(14)16/h1-9,12,17-18,21H,10-11H2,(H,22,25)(H,23,24)/t17-,18-/m0/s1
Calculated Properties
ALogP:
1.936 lipophilicity
TPSA:
73.99 Ų polar surface area
H-Bond Donors:
3
H-Bond Acceptors:
2
Rotatable Bonds:
4
Ring Count:
4 (3 aromatic)
Chiral Centers:
2
Fsp³:
0.2000 fraction sp³ carbon

Database Information

Compound ID:
SCS-C000056
NPClassifier Pathway:
Alkaloids Amino acids and Peptides
NPClassifier Superclass:
Peptide alkaloids Small peptides
NPClassifier Class:
Dipeptides Indole diketopiperazine alkaloids (L-Trp, L-Trp) Other indole diketopiperazine alkaloids Simple diketopiperazine alkaloids
Glycoside:
No
NPClassifier Status:
Classified
External Links:

Biological Activity Data

Activity values are displayed only when a quantitative or clearly reported result is available. Tested organisms, cell lines and molecular targets are shown under Target / model.
Activity Assay Target / model Result Reference
Antitumor IC50 human tumor cell lines 3.3 μg/mL 10.1007/s00449-010-0464-0 Bioprocess and Biosystems Engineering
Structure enlarged