SCS-C000240

variecolorin M

Pathway: Alkaloids | Amino acids and Peptides Superclass: Peptide alkaloids Class: Indole diketopiperazine alkaloids (L-Trp, L-Ala)

Chemical Structure

Structure of variecolorin M
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Aspergillus sp. (coral-derived fungus)
Kingdom Fungi Phylum Ascomycota Class Eurotiomycetes Order Eurotiales Family Aspergillaceae Genus Aspergillus Species NA
South China Sea
DOI: 10.1002/cbdv.202000106  · Chemistry & Biodiversity

Drug-likeness (Lipinski Ro5)

Molecular Weight
407.5 Da
Threshold ≤ 500
ALogP
3.09
Threshold ≤ 5
H-Bond Donors
4
Threshold ≤ 5
H-Bond Acceptors
3
Threshold ≤ 10
Passes Lipinski Rule of Five — drug-like candidate

Chemical Properties

Molecular Formula:
C24H29N3O3
Molecular Weight:
407.5000 Da
SMILES:
C=CC(C)(C)c1[nH]c2c(C/C=C(/C)CO)cccc2c1/C=C1\NC(=O)[C@H](C)NC1=O
InChIKey:
ABLYEZZJYZHBEO-MORIRKSKSA-N
InChI:
InChI=1S/C24H29N3O3/c1-6-24(4,5)21-18(12-19-23(30)25-15(3)22(29)26-19)17-9-7-8-16(20(17)27-21)11-10-14(2)13-28/h6-10,12,15,27-28H,1,11,13H2,2-5H3,(H,25,30)(H,26,29)/b14-10-,19-12-/t15-/m0/s1
Calculated Properties
ALogP:
3.088 lipophilicity
TPSA:
94.22 Ų polar surface area
H-Bond Donors:
4
H-Bond Acceptors:
3
Rotatable Bonds:
6
Ring Count:
3 (2 aromatic)
Chiral Centers:
1
Fsp³:
0.3333 fraction sp³ carbon

Database Information

Compound ID:
SCS-C000240
NPClassifier Pathway:
Alkaloids Amino acids and Peptides
NPClassifier Superclass:
Peptide alkaloids
NPClassifier Class:
Indole diketopiperazine alkaloids (L-Trp, L-Ala)
Glycoside:
No
NPClassifier Status:
Classified
External Links:

Biological Activity Data

No bioactivity data available for this compound.

Structure enlarged