SCS-C001162

avermectin B1e

Pathway: Polyketides Superclass: Macrolides Class: Avermectins Glycoside

Chemical Structure

Structure of avermectin B1e
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Anthogorgia caerulea (gorgonian)
Kingdom Metazoa Phylum Cnidaria Class Anthozoa Order Malacalcyonacea Family Anthogorgiidae Genus Anthogorgia Species Anthogorgia caerulea
Beibu Gulf
DOI: 10.1002/cbdv.201300265  · Chemistry & Biodiversity

Drug-likeness (Lipinski Ro5)

Molecular Weight
915.2 Da
Threshold ≤ 500
ALogP
6.40
Threshold ≤ 5
H-Bond Donors
3
Threshold ≤ 5
H-Bond Acceptors
14
Threshold ≤ 10
3 violations (MW, ALogP, HBA) — not drug-like by Ro5

Chemical Properties

Molecular Formula:
C51H78O14
Molecular Weight:
915.1710 Da
SMILES:
CO[C@H]1C[C@H](O[C@H]2[C@H](C)O[C@@H](O[C@@H]3/C(C)=C/C[C@@H]4C[C@@H](C[C@]5(C=C[C@H](C)[C@@H]([C@@H](C)CCC(C)C)O5)O4)OC(=O)[C@@H]4C=C(C)[C@@H](O)[C@H]5OC/C(=C\C=C\[C@@H]3C)[C@]54O)C[C@@H]2OC)O[C@@H](C)[C@@H]1O
InChIKey:
OEAWQZIBRYYPLE-VAAGPONXSA-N
InChI:
InChI=1S/C51H78O14/c1-27(2)15-16-30(5)46-31(6)19-20-50(65-46)25-37-22-36(64-50)18-17-29(4)45(28(3)13-12-14-35-26-58-48-43(52)32(7)21-38(49(54)61-37)51(35,48)55)62-42-24-40(57-11)47(34(9)60-42)63-41-23-39(56-10)44(53)33(8)59-41/h12-14,17,19-21,27-28,30-31,33-34,36-48,52-53,55H,15-16,18,22-26H2,1-11H3/b13-12+,29-17+,35-14+/t28-,30-,31-,33-,34-,36+,37-,38-,39-,40-,41-,42-,43+,44-,45-,46+,47-,48+,50+,51+/m0/s1
Calculated Properties
ALogP:
6.404 lipophilicity
TPSA:
170.06 Ų polar surface area
H-Bond Donors:
3
H-Bond Acceptors:
14
Rotatable Bonds:
10
Ring Count:
7 (0 aromatic)
Chiral Centers:
20
Fsp³:
0.7843 fraction sp³ carbon

Database Information

Compound ID:
SCS-C001162
NPClassifier Pathway:
Polyketides
NPClassifier Superclass:
Macrolides
NPClassifier Class:
Avermectins
Glycoside:
Yes
NPClassifier Status:
Classified
External Links:

Biological Activity Data

Activity values are displayed only when a quantitative or clearly reported result is available. Tested organisms, cell lines and molecular targets are shown under Target / model.
Activity Assay Target / model Result Reference
Antifouling ED50 larval settlement of Balanus amphitrite 6.3 μg/mL 10.1002/cbdv.201300265 Chemistry & Biodiversity
Structure enlarged