SCS-C001194

emestrin M

Pathway: Alkaloids | Amino acids and Peptides Superclass: Peptide alkaloids Class: Thiodiketopiperazine alkaloids

Chemical Structure

Structure of emestrin M
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Aspergillus terreus RA2905 (mangrove endophytic fungus)
Kingdom Fungi Phylum Ascomycota Class Eurotiomycetes Order Eurotiales Family Aspergillaceae Genus Aspergillus Species Aspergillus terreus
Beibu Gulf
DOI: 10.3390/md18030132  · Marine Drugs

Drug-likeness (Lipinski Ro5)

Molecular Weight
434.5 Da
Threshold ≤ 500
ALogP
1.57
Threshold ≤ 5
H-Bond Donors
3
Threshold ≤ 5
H-Bond Acceptors
7
Threshold ≤ 10
Passes Lipinski Rule of Five — drug-like candidate

Chemical Properties

Molecular Formula:
C20H22N2O5S2
Molecular Weight:
434.5000 Da
SMILES:
CS[C@@]1(Cc2ccccc2O)NC(=O)[C@]2(SC)CC3=COC=C[C@H](O)[C@H]3N2C1=O
InChIKey:
BXICUEGSLMRXKC-XAMWDVODSA-N
InChI:
InChI=1S/C20H22N2O5S2/c1-28-19(9-12-5-3-4-6-14(12)23)18(26)22-16-13(11-27-8-7-15(16)24)10-20(22,29-2)17(25)21-19/h3-8,11,15-16,23-24H,9-10H2,1-2H3,(H,21,25)/t15-,16-,19+,20+/m0/s1
Calculated Properties
ALogP:
1.573 lipophilicity
TPSA:
99.10 Ų polar surface area
H-Bond Donors:
3
H-Bond Acceptors:
7
Rotatable Bonds:
4
Ring Count:
4 (1 aromatic)
Chiral Centers:
4
Fsp³:
0.4000 fraction sp³ carbon

Database Information

Compound ID:
SCS-C001194
NPClassifier Pathway:
Alkaloids Amino acids and Peptides
NPClassifier Superclass:
Peptide alkaloids
NPClassifier Class:
Thiodiketopiperazine alkaloids
Glycoside:
No
NPClassifier Status:
Classified
External Links:

Biological Activity Data

Activity values are displayed only when a quantitative or clearly reported result is available. Tested organisms, cell lines and molecular targets are shown under Target / model.
Activity Assay Target / model Result Reference
Antibacterial MIC Pseudomonas aeruginosa ATCC 27853 64.0 μg/mL 10.3390/md18030132 Marine Drugs
Structure enlarged