SCS-C001274

emodacidamide A

Pathway: Polyketides Superclass: Polycyclic aromatic polyketides Class: Anthraquinones and anthrones

Chemical Structure

Structure of emodacidamide A
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Penicillium sp. SCSIO sof101 (soft coral-derived fungus)
South China Sea  · -2448m  · 112°124′ E, 18°0.541′ N
DOI: 10.1021/acs.jnatprod.7b00269  · Journal of Natural Products

Drug-likeness (Lipinski Ro5)

Molecular Weight
413.4 Da
Threshold ≤ 500
ALogP
1.51
Threshold ≤ 5
H-Bond Donors
4
Threshold ≤ 5
H-Bond Acceptors
8
Threshold ≤ 10
Passes Lipinski Rule of Five — drug-like candidate

Chemical Properties

Molecular Formula:
C21H19NO8
Molecular Weight:
413.4000 Da
SMILES:
COC(=O)[C@@H](NC(=O)c1cc(O)c2c(c1)C(=O)c1cc(O)cc(O)c1C2=O)C(C)C
InChIKey:
MJPQABXBKRQYAG-KRWDZBQOSA-N
InChI:
InChI=1S/C21H19NO8/c1-8(2)17(21(29)30-3)22-20(28)9-4-11-15(13(24)5-9)19(27)16-12(18(11)26)6-10(23)7-14(16)25/h4-8,17,23-25H,1-3H3,(H,22,28)/t17-/m0/s1
Calculated Properties
ALogP:
1.506 lipophilicity
TPSA:
150.23 Ų polar surface area
H-Bond Donors:
4
H-Bond Acceptors:
8
Rotatable Bonds:
4
Ring Count:
3 (2 aromatic)
Chiral Centers:
1
Fsp³:
0.2381 fraction sp³ carbon

Database Information

Compound ID:
SCS-C001274
NPClassifier Pathway:
Polyketides
NPClassifier Superclass:
Polycyclic aromatic polyketides
NPClassifier Class:
Anthraquinones and anthrones
Glycoside:
No
NPClassifier Status:
Classified
External Links:

Biological Activity Data

Activity values are displayed only when a quantitative or clearly reported result is available. Tested organisms, cell lines and molecular targets are shown under Target / model.
Activity Assay Target / model Result Reference
Antitumor IC50 Jurkat cells 4.1 μM 10.1021/acs.jnatprod.7b00269 Journal of Natural Products
Structure enlarged