SCS-C001276

emodacidamide C

Pathway: Polyketides Superclass: Polycyclic aromatic polyketides Class: Anthraquinones and anthrones

Chemical Structure

Structure of emodacidamide C
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Penicillium sp. SCSIO sof101 (soft coral-derived fungus)
South China Sea  · -2448m  · 112°124′ E, 18°0.543′ N
DOI: 10.1021/acs.jnatprod.7b00269  · Journal of Natural Products

Drug-likeness (Lipinski Ro5)

Molecular Weight
433.8 Da
Threshold ≤ 500
ALogP
2.07
Threshold ≤ 5
H-Bond Donors
5
Threshold ≤ 5
H-Bond Acceptors
7
Threshold ≤ 10
Passes Lipinski Rule of Five — drug-like candidate

Chemical Properties

Molecular Formula:
C20H16ClNO8
Molecular Weight:
433.8000 Da
SMILES:
CC(C)[C@H](NC(=O)c1cc(O)c2c(c1)C(=O)c1cc(O)c(Cl)c(O)c1C2=O)C(=O)O
InChIKey:
AVIVKUDKCMVAOA-HNNXBMFYSA-N
InChI:
InChI=1S/C20H16ClNO8/c1-6(2)15(20(29)30)22-19(28)7-3-8-12(10(23)4-7)17(26)13-9(16(8)25)5-11(24)14(21)18(13)27/h3-6,15,23-24,27H,1-2H3,(H,22,28)(H,29,30)/t15-/m0/s1
Calculated Properties
ALogP:
2.071 lipophilicity
TPSA:
161.23 Ų polar surface area
H-Bond Donors:
5
H-Bond Acceptors:
7
Rotatable Bonds:
4
Ring Count:
3 (2 aromatic)
Chiral Centers:
1
Fsp³:
0.2000 fraction sp³ carbon

Database Information

Compound ID:
SCS-C001276
NPClassifier Pathway:
Polyketides
NPClassifier Superclass:
Polycyclic aromatic polyketides
NPClassifier Class:
Anthraquinones and anthrones
Glycoside:
No
NPClassifier Status:
Classified
External Links:

Biological Activity Data

Activity values are displayed only when a quantitative or clearly reported result is available. Tested organisms, cell lines and molecular targets are shown under Target / model.
Activity Assay Target / model Result Reference
Antitumor IC50 Jurkat cells 5.1 μM 10.1021/acs.jnatprod.7b00269 Journal of Natural Products
Structure enlarged