SCS-C001913

dactylospongin D

Pathway: Terpenoids Superclass: Diterpenoids Class: Colensane and Clerodane diterpenoids

Chemical Structure

Structure of dactylospongin D
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Dactylospongia sp. (marine sponge)
Kingdom Metazoa Phylum Porifera Class Demospongiae Order Dictyoceratida Family Thorectidae Genus Dactylospongia Species NA
Xisha Islands
DOI: 10.1039/c8ob01580e  · Organic & Biomolecular Chemistry

Drug-likeness (Lipinski Ro5)

Molecular Weight
342.5 Da
Threshold ≤ 500
ALogP
5.30
Threshold ≤ 5
H-Bond Donors
2
Threshold ≤ 5
H-Bond Acceptors
2
Threshold ≤ 10
1 violation (ALogP) — borderline drug-like

Chemical Properties

Molecular Formula:
C22H31NO2
Molecular Weight:
342.5011 Da
SMILES:
[2H]C(=O)Nc1ccc(O)c(C[C@]2(C)[C@@H](C)CC[C@]3(C)C(=C)CCC[C@@H]23)c1
InChIKey:
XNIZAELIYWZMED-ITAFLYOBSA-N
InChI:
InChI=1S/C22H31NO2/c1-15-6-5-7-20-21(15,3)11-10-16(2)22(20,4)13-17-12-18(23-14-24)8-9-19(17)25/h8-9,12,14,16,20,25H,1,5-7,10-11,13H2,2-4H3,(H,23,24)/t16-,20+,21+,22+/m0/s1/i14D
Calculated Properties
ALogP:
5.302 lipophilicity
TPSA:
49.33 Ų polar surface area
H-Bond Donors:
2
H-Bond Acceptors:
2
Rotatable Bonds:
3
Ring Count:
3 (1 aromatic)
Chiral Centers:
4
Fsp³:
0.5909 fraction sp³ carbon

Database Information

Compound ID:
SCS-C001913
NPClassifier Pathway:
Terpenoids
NPClassifier Superclass:
Diterpenoids
NPClassifier Class:
Colensane and Clerodane diterpenoids
Glycoside:
No
NPClassifier Status:
Classified
External Links:

Biological Activity Data

Activity values are displayed only when a quantitative or clearly reported result is available. Tested organisms, cell lines and molecular targets are shown under Target / model.
Activity Assay Target / model Result Reference
Anti-inflammatory IC50 IL-6,IL-1β,IL-8,PGE2 5.1–9.2 μM 10.1039/c8ob01580e Organic & Biomolecular Chemistry
Structure enlarged