SCS-C005665

gymnastatin Z

Pathway: Alkaloids Superclass: Peptide alkaloids Class: Simple amide alkaloids

Chemical Structure

Structure of gymnastatin Z
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Westerdykella dispersa (NA)
Guangzhou
DOI: 10.1038/s41598-017-12327-1  · Scientific Reports

Drug-likeness (Lipinski Ro5)

Molecular Weight
401.6 Da
Threshold ≤ 500
ALogP
5.30
Threshold ≤ 5
H-Bond Donors
3
Threshold ≤ 5
H-Bond Acceptors
3
Threshold ≤ 10
1 violation (ALogP) — borderline drug-like

Chemical Properties

Molecular Formula:
C25H39NO3
Molecular Weight:
401.5910 Da
SMILES:
CCCCCCCCC(C)/C=C(C)/C=C/C(=O)NC(CO)Cc1ccc(O)cc1
InChIKey:
WFNJGQLTDMBMCF-KCLOMAENSA-N
InChI:
InChI=1S/C25H39NO3/c1-4-5-6-7-8-9-10-20(2)17-21(3)11-16-25(29)26-23(19-27)18-22-12-14-24(28)15-13-22/h11-17,20,23,27-28H,4-10,18-19H2,1-3H3,(H,26,29)/b16-11+,21-17+
Calculated Properties
ALogP:
5.301 lipophilicity
TPSA:
69.56 Ų polar surface area
H-Bond Donors:
3
H-Bond Acceptors:
3
Rotatable Bonds:
14
Ring Count:
1 (1 aromatic)
Chiral Centers:
2
Fsp³:
0.5600 fraction sp³ carbon

Database Information

Compound ID:
SCS-C005665
NPClassifier Pathway:
Alkaloids
NPClassifier Superclass:
Peptide alkaloids
NPClassifier Class:
Simple amide alkaloids
Glycoside:
No
NPClassifier Status:
Classified
External Links:

Biological Activity Data

No bioactivity data available for this compound.

Structure enlarged