SCS-C005796

JBIR-24

Pathway: Polyketides Superclass: Cyclic polyketides Class: Decalins with side chains Glycoside

Chemical Structure

Structure of JBIR-24
Loading 3D structure...
3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Streptomyces malaysiensis HNM0561 (NA)
Kingdom Bacillati Phylum Actinomycetota Class Actinomycetes Order Kitasatosporales Family Streptomycetaceae Genus Streptomyces Species Streptomyces malaysiensis
Wenchang  · 110.75E, 19.61N
DOI: 10.1002/cbdv.71279  · Chemistry & Biodiversity

Drug-likeness (Lipinski Ro5)

Molecular Weight
388.4 Da
Threshold ≤ 500
ALogP
1.88
Threshold ≤ 5
H-Bond Donors
2
Threshold ≤ 5
H-Bond Acceptors
6
Threshold ≤ 10
Passes Lipinski Rule of Five — drug-like candidate

Chemical Properties

Molecular Formula:
C21H24O7
Molecular Weight:
388.4160 Da
SMILES:
COC(=C\C(C)=C\[C@H]1CCC[C@@]2(O)O[C@H]3C(=CC(=O)[C@H]4O[C@H]43)[C@H]12)/C=C/C(=O)O
InChIKey:
ZMORYXMUVFYWLG-YLWXYFBXSA-N
InChI:
InChI=1S/C21H24O7/c1-11(9-13(26-2)5-6-16(23)24)8-12-4-3-7-21(25)17(12)14-10-15(22)19-20(27-19)18(14)28-21/h5-6,8-10,12,17-20,25H,3-4,7H2,1-2H3,(H,23,24)/b6-5+,11-8+,13-9-/t12-,17+,18+,19-,20+,21-/m1/s1
Calculated Properties
ALogP:
1.884 lipophilicity
TPSA:
105.59 Ų polar surface area
H-Bond Donors:
2
H-Bond Acceptors:
6
Rotatable Bonds:
5
Ring Count:
4 (0 aromatic)
Chiral Centers:
6
Fsp³:
0.5238 fraction sp³ carbon

Database Information

Compound ID:
SCS-C005796
NPClassifier Pathway:
Polyketides
NPClassifier Superclass:
Cyclic polyketides
NPClassifier Class:
Decalins with side chains
Glycoside:
Yes
NPClassifier Status:
Classified
External Links:

Biological Activity Data

Activity values are displayed only when a quantitative or clearly reported result is available. Tested organisms, cell lines and molecular targets are shown under Target / model.
Activity Assay Target / model Result Reference
Anti-inflammatory inhibition_percent NO production 14.0 % 10.1002/cbdv.71279 Chemistry & Biodiversity
Structure enlarged