SCS-C005980

Smenospongimine

Pathway: Terpenoids Superclass: Diterpenoids Class: Halimane diterpenoids

Chemical Structure

Structure of Smenospongimine
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Dysidea sp. (NA)
Kingdom Metazoa Phylum Porifera Class Demospongiae Order Dictyoceratida Family Dysideidae Genus Dysidea Species NA
Xisha Islands  · about 20 m  · 16°50′N, 112°20′E
DOI: 10.1248/cpb.c16-00183  · CHEMICAL & PHARMACEUTICAL BULLETIN

Drug-likeness (Lipinski Ro5)

Molecular Weight
357.5 Da
Threshold ≤ 500
ALogP
4.24
Threshold ≤ 5
H-Bond Donors
2
Threshold ≤ 5
H-Bond Acceptors
4
Threshold ≤ 10
Passes Lipinski Rule of Five — drug-like candidate

Chemical Properties

Molecular Formula:
C22H31NO3
Molecular Weight:
357.4940 Da
SMILES:
C=C1CCC[C@H]2[C@](C)(CC3=C(O)C(=O)C=C(NC)C3=O)[C@@H](C)CC[C@]12C
InChIKey:
XQQSHLVZAKUOGJ-YVUMSICPSA-N
InChI:
InChI=1S/C22H31NO3/c1-13-7-6-8-18-21(13,3)10-9-14(2)22(18,4)12-15-19(25)16(23-5)11-17(24)20(15)26/h11,14,18,23,26H,1,6-10,12H2,2-5H3/t14-,18+,21+,22+/m0/s1
Calculated Properties
ALogP:
4.242 lipophilicity
TPSA:
66.40 Ų polar surface area
H-Bond Donors:
2
H-Bond Acceptors:
4
Rotatable Bonds:
3
Ring Count:
3 (0 aromatic)
Chiral Centers:
4
Fsp³:
0.6364 fraction sp³ carbon

Database Information

Compound ID:
SCS-C005980
NPClassifier Pathway:
Terpenoids
NPClassifier Superclass:
Diterpenoids
NPClassifier Class:
Halimane diterpenoids
Glycoside:
No
NPClassifier Status:
Classified
External Links:

Biological Activity Data

Activity values are displayed only when a quantitative or clearly reported result is available. Tested organisms, cell lines and molecular targets are shown under Target / model.
Activity Assay Target / model Result Reference
Antibacterial MIC Escherichia coli (25922), Bacillus subtilis (6633), Staphylococcus aureus (25923) 3.125–12.5 μg/mL 10.1248/cpb.c16-00183 CHEMICAL & PHARMACEUTICAL BULLETIN
Structure enlarged