SCS-C005982

smenospongorine

Pathway: Terpenoids Superclass: Diterpenoids Class: Halimane diterpenoids

Chemical Structure

Structure of smenospongorine
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Dysidea sp. (NA)
Kingdom Metazoa Phylum Porifera Class Demospongiae Order Dictyoceratida Family Dysideidae Genus Dysidea Species NA
Xisha Islands  · about 20 m  · 16°50′N, 112°20′E
DOI: 10.1248/cpb.c16-00183  · CHEMICAL & PHARMACEUTICAL BULLETIN

Drug-likeness (Lipinski Ro5)

Molecular Weight
399.6 Da
Threshold ≤ 500
ALogP
5.27
Threshold ≤ 5
H-Bond Donors
2
Threshold ≤ 5
H-Bond Acceptors
4
Threshold ≤ 10
1 violation (ALogP) — borderline drug-like

Chemical Properties

Molecular Formula:
C25H37NO3
Molecular Weight:
399.5750 Da
SMILES:
C=C1CCC[C@H]2[C@](C)(CC3=C(O)C(=O)C=C(NCC(C)C)C3=O)[C@@H](C)CC[C@]12C
InChIKey:
HKFPJBYYBSZFCI-CMEURUHUSA-N
InChI:
InChI=1S/C25H37NO3/c1-15(2)14-26-19-12-20(27)23(29)18(22(19)28)13-25(6)17(4)10-11-24(5)16(3)8-7-9-21(24)25/h12,15,17,21,26,29H,3,7-11,13-14H2,1-2,4-6H3/t17-,21+,24+,25+/m0/s1
Calculated Properties
ALogP:
5.269 lipophilicity
TPSA:
66.40 Ų polar surface area
H-Bond Donors:
2
H-Bond Acceptors:
4
Rotatable Bonds:
5
Ring Count:
3 (0 aromatic)
Chiral Centers:
4
Fsp³:
0.6800 fraction sp³ carbon

Database Information

Compound ID:
SCS-C005982
NPClassifier Pathway:
Terpenoids
NPClassifier Superclass:
Diterpenoids
NPClassifier Class:
Halimane diterpenoids
Glycoside:
No
NPClassifier Status:
Classified
External Links:

Biological Activity Data

Activity values are displayed only when a quantitative or clearly reported result is available. Tested organisms, cell lines and molecular targets are shown under Target / model.
Activity Assay Target / model Result Reference
Antibacterial MIC Escherichia coli (25922), Bacillus subtilis (6633), Staphylococcus aureus (25923) 3.125–12.5 μg/mL 10.1248/cpb.c16-00183 CHEMICAL & PHARMACEUTICAL BULLETIN
Structure enlarged