SCS-C006401
epicoccolide A
Pathway: Polyketides
Superclass: Aromatic polyketides
Chemical Structure
Loading 3D structure...
3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Source Information
Epicoccum nigrum
(NA)
Kingdom
Fungi
Phylum
Ascomycota
Class
Dothideomycetes
Order
Pleosporales
Family
Didymellaceae
Genus
Epicoccum
Species
Epicoccum nigrum
South China Sea
DOI:
10.3390/md19070395
· Marine Drugs
Drug-likeness (Lipinski Ro5)
Molecular Weight
374.3 Da
Threshold ≤ 500
ALogP
1.99
Threshold ≤ 5
H-Bond Donors
5
Threshold ≤ 5
H-Bond Acceptors
9
Threshold ≤ 10
Passes Lipinski Rule of Five — drug-like candidate
Chemical Properties
Molecular Formula:
C18H14O9
Molecular Weight:
374.3010 Da
SMILES:
Cc1c(O)c(O)c2c(c1C=O)[C@@H]1O[C@@H](O2)c2c(O)c(O)c(O)c(C)c2C1=O
InChIKey:
VFBCGYVZJVAFIO-WMZOPIPTSA-N
InChI:
InChI=1S/C18H14O9/c1-4-6(3-19)8-16-13(23)7-5(2)11(21)14(24)12(22)9(7)18(26-16)27-17(8)15(25)10(4)20/h3,16,18,20-22,24-25H,1-2H3/t16-,18-/m0/s1
Calculated Properties
ALogP:
1.989 lipophilicity
TPSA:
153.75 Ų polar surface area
H-Bond Donors:
5
H-Bond Acceptors:
9
Rotatable Bonds:
1
Ring Count:
4
(2 aromatic)
Chiral Centers:
2
Fsp³:
0.2222 fraction sp³ carbon
Database Information
Compound ID:
SCS-C006401
NPClassifier Pathway:
Polyketides
NPClassifier Superclass:
Aromatic polyketides
NPClassifier Class:
N/A
Glycoside:
No
NPClassifier Status:
Classified
External Links:
General chemistry
Natural product databases
Biological Activity Data
Activity values are displayed only when a quantitative or clearly reported result is available.
Tested organisms, cell lines and molecular targets are shown under Target / model.
| Activity | Assay | Target / model | Result | Reference |
|---|---|---|---|---|
| Antioxidant | IC50 | DPPH radical | 14.7 μM | 10.3390/md19070395 Marine Drugs |
| Antioxidant | IC50 | ABTS radical cation | 18.8 μM | 10.3390/md19070395 Marine Drugs |