SCS-C006958

Phakine G

Pathway: Alkaloids

Chemical Structure

Structure of Phakine G
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Phakellia fusca (NA)
Kingdom Metazoa Phylum Porifera Class Demospongiae Order Axinellida Family Axinellidae Genus Phakellia Species Phakellia fusca
South China Sea
DOI: 10.1016/j.phytochem.2024.114250  · Phytochemistry

Drug-likeness (Lipinski Ro5)

Molecular Weight
250.3 Da
Threshold ≤ 500
ALogP
-0.23
Threshold ≤ 5
H-Bond Donors
3
Threshold ≤ 5
H-Bond Acceptors
4
Threshold ≤ 10
Passes Lipinski Rule of Five — drug-like candidate

Chemical Properties

Molecular Formula:
C12H14N2O4
Molecular Weight:
250.2540 Da
SMILES:
CCOC(=O)C1(O)C2CNC(=O)c3[nH]ccc3C21
InChIKey:
SIURPGZGBIXQNB-UHFFFAOYSA-N
InChI:
InChI=1S/C12H14N2O4/c1-2-18-11(16)12(17)7-5-14-10(15)9-6(8(7)12)3-4-13-9/h3-4,7-8,13,17H,2,5H2,1H3,(H,14,15)
Calculated Properties
ALogP:
-0.234 lipophilicity
TPSA:
91.42 Ų polar surface area
H-Bond Donors:
3
H-Bond Acceptors:
4
Rotatable Bonds:
2
Ring Count:
3 (1 aromatic)
Chiral Centers:
3
Fsp³:
0.5000 fraction sp³ carbon

Database Information

Compound ID:
SCS-C006958
NPClassifier Pathway:
Alkaloids
NPClassifier Superclass:
N/A
NPClassifier Class:
N/A
Glycoside:
No
NPClassifier Status:
Classified
External Links:

Biological Activity Data

Activity values are displayed only when a quantitative or clearly reported result is available. Tested organisms, cell lines and molecular targets are shown under Target / model.
Activity Assay Target / model Result Reference
Anti-inflammatory — IL-6 — Structured numeric value is not available in this record; see the primary reference. 10.1016/j.phytochem.2024.114250 Phytochemistry
Structure enlarged