SCS-C007245

aspernigrin B

Pathway: Alkaloids Superclass: Nicotinic acid alkaloids Class: Pyridine alkaloids

Chemical Structure

Structure of aspernigrin B
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Aspergillus niger SCSIO Jcsw6F30 (alga)
Kingdom Fungi Phylum Ascomycota Class Eurotiomycetes Order Eurotiales Family Aspergillaceae Genus Aspergillus Species Aspergillus niger
South China Sea
DOI: 10.1016/j.bmcl.2015.12.005  · Bioorganic & Medicinal Chemistry Letters

Drug-likeness (Lipinski Ro5)

Molecular Weight
456.5 Da
Threshold ≤ 500
ALogP
3.33
Threshold ≤ 5
H-Bond Donors
1
Threshold ≤ 5
H-Bond Acceptors
6
Threshold ≤ 10
Passes Lipinski Rule of Five — drug-like candidate

Chemical Properties

Molecular Formula:
C27H24N2O5
Molecular Weight:
456.4980 Da
SMILES:
COc1cc([C@H](Cc2ccccc2)n2cc(C(N)=O)c(=O)cc2Cc2ccccc2)oc(=O)c1
InChIKey:
CPVCVIXCXKPURM-QHCPKHFHSA-N
InChI:
InChI=1S/C27H24N2O5/c1-33-21-15-25(34-26(31)16-21)23(13-19-10-6-3-7-11-19)29-17-22(27(28)32)24(30)14-20(29)12-18-8-4-2-5-9-18/h2-11,14-17,23H,12-13H2,1H3,(H2,28,32)/t23-/m0/s1
Calculated Properties
ALogP:
3.332 lipophilicity
TPSA:
104.53 Ų polar surface area
H-Bond Donors:
1
H-Bond Acceptors:
6
Rotatable Bonds:
8
Ring Count:
4 (4 aromatic)
Chiral Centers:
1
Fsp³:
0.1481 fraction sp³ carbon

Database Information

Compound ID:
SCS-C007245
NPClassifier Pathway:
Alkaloids
NPClassifier Superclass:
Nicotinic acid alkaloids
NPClassifier Class:
Pyridine alkaloids
Glycoside:
No
NPClassifier Status:
Classified
External Links:

Biological Activity Data

Activity values are displayed only when a quantitative or clearly reported result is available. Tested organisms, cell lines and molecular targets are shown under Target / model.
Activity Assay Target / model Result Reference
Antiviral inhibition CCR5-tropic HIV-1 SF162 infection — Structured numeric value is not available in this record; see the primary reference. 10.1016/j.bmcl.2015.12.005 Bioorganic & Medicinal Chemistry Letters
Structure enlarged