SCS-C007479

fennebricin D

Pathway: Alkaloids Superclass: Tyrosine alkaloids Class: Tetrahydroisoquinoline alkaloids

Chemical Structure

Structure of fennebricin D
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3D conformers are computationally generated from SMILES by RDKit for visualization and download; they are not experimental crystal or NMR structures.
Download: SDF SMILES

Source Information

Xestospongia sp. (sponge)
Kingdom Metazoa Phylum Porifera Class Demospongiae Order Haplosclerida Family Petrosiidae Genus Xestospongia Species NA
South China Sea  · 10 m
DOI: 10.4155/fmc.15.169  · Future Medicinal Chemistry

Drug-likeness (Lipinski Ro5)

Molecular Weight
650.7 Da
Threshold ≤ 500
ALogP
2.13
Threshold ≤ 5
H-Bond Donors
0
Threshold ≤ 5
H-Bond Acceptors
12
Threshold ≤ 10
2 violations (MW, HBA) — not drug-like by Ro5

Chemical Properties

Molecular Formula:
C35H42N2O10
Molecular Weight:
650.7250 Da
SMILES:
C/C=C(/C)C(=O)OC[C@H]1C2=C(C[C@H]3[C@H]4C5=C(C(=O)C(C)=C(OC)C5=O)[C@H](OCC)[C@@H]([C@H](CC(C)=O)N13)N4C)C(=O)C(C)=C(OC)C2=O
InChIKey:
OLLBAXAKBWEJLN-PREFKONUSA-N
InChI:
InChI=1S/C35H42N2O10/c1-10-15(3)35(43)47-14-22-23-19(28(39)17(5)32(44-8)30(23)41)13-21-26-24-25(29(40)18(6)33(45-9)31(24)42)34(46-11-2)27(36(26)7)20(37(21)22)12-16(4)38/h10,20-22,26-27,34H,11-14H2,1-9H3/b15-10-/t20-,21-,22-,26-,27+,34-/m0/s1
Calculated Properties
ALogP:
2.125 lipophilicity
TPSA:
145.82 Ų polar surface area
H-Bond Donors:
0
H-Bond Acceptors:
12
Rotatable Bonds:
9
Ring Count:
5 (0 aromatic)
Chiral Centers:
6
Fsp³:
0.5429 fraction sp³ carbon

Database Information

Compound ID:
SCS-C007479
NPClassifier Pathway:
Alkaloids
NPClassifier Superclass:
Tyrosine alkaloids
NPClassifier Class:
Tetrahydroisoquinoline alkaloids
Glycoside:
No
NPClassifier Status:
Classified
External Links:

Biological Activity Data

Activity values are displayed only when a quantitative or clearly reported result is available. Tested organisms, cell lines and molecular targets are shown under Target / model.
Activity Assay Target / model Result Reference
Anti-inflammatory IC50 NF-κB signaling pathway 5.7 μM 10.4155/fmc.15.169 Future Medicinal Chemistry
Antitumor IC50 A549 and HL-60 tumor cell lines > 100.0 μM 10.4155/fmc.15.169 Future Medicinal Chemistry
Structure enlarged